Sebastian Gollmer, M.Sc.

Research Associate

• Statistical shape modeling
• Medical image computing
• Computer vision
• Pattern analysis and machine intelligence

Statistical Shape Model Based 3D Image Analysis

Einführung in die Medizintechnik (Vorlesung, Sommersemester)
Einführung in die Medizintechnik (Übung, Sommersemester)

SEBASTIAN GOLLMER was born in Münsingen, Germany, in 1981. He received his Dipl-Ing. (FH) in Medical Engineering and Sportsmedical Engineering in 2006 from the RheinAhrCampus Remagen. During his practical term in 2004/2005, he joined the “Biosignalanalyse” group at the Institute of Applied Informatics, Forschungszentrum Karlsruhe and worked there on the software “DAVE-Design” for analysis of EMG signals. In 2005, he participated on the development of the Software “Gait-CAD” for gait analysis. He wrote his Diploma Thesis in 2006 at BrainLAB AG in the field of statistical modelling applied to non-rigid image registration. In 2009, he wrote his Master's Thesis at the Institute of Medical Engineering, University of Lübeck in the field of construction and quantitative evaluation of statistical shape models. Currently, he is a research assistant at the Institute of Medical Engineering.

S. T. Gollmer, T. M. Buzug: Relaxed Statistical Shape Models for 3D Image Segmentation – Application to Mandible Bone in Cone-beam CT Data, to be published in: Current Medical Imaging Reviews, 2013

F. S. Burmester, S. T. Gollmer, T. M. Buzug: Untersuchung der Normalverteilungsannahme bei der statistischen Formmodellierung, Bildverarbeitung für die Medizin 2013, 2013

S. T. Gollmer, M. Simon, A. Bischof, J. Barkhausen, T. M. Buzug: Towards Segmentation of the Upper Abdomen using a Multi-Object Active Shape Model, 46. DGBMT Jahrestagung, 2012, Jena, Germany

S. T. Gollmer, T. M. Buzug: Triangulating Quadrilaterals on the Sphere: Application to Shape Analysis, 46. DGBMT Jahrestagung, 2012, Jena, Germany

S. T. Gollmer, M. Simon, A. Bischof, J. Barkhausen, T. M. Buzug: Multi-Object Active Shape Model Construction for Abdomen Segmentation: Preliminary Results, Annual International Conference of the IEEE Engineering in Medicine and Biology Society EMBC 2012, 2012, San Diego, USA

S. T. Gollmer, T. M. Buzug: Fully Automatic Shape Constrained Mandible Segmentation from Cone-Beam CT Data, IEEE International Symposium on Biomedical Imaging ISBI 2012, 2012, Barcelona, Spain, p.1272-1275

S. T. Gollmer, T. M. Buzug: Formmodellbasierte Segmentierung des Unterkiefers aus Dental-CT-Aufnahmen: Ein vollautomatischer Ansatz, Bildverarbeitung für die Medizin, 2012, Berlin, Germany, p.15-20

S. T. Gollmer, A. Curie, T. M. Buzug: Mandible Segmentation in Low-Dose Cone-Beam CT Using an Optimal Statistical Shape Model, Biomed Tech 2011, 2011, 56 (Suppl 1)

M. Kirschner, S. T. Gollmer, S. Wesarg, T. M. Buzug: Optimal Initialization for 3D Correspondence Optimization: An Evaluation Study, Proc. IPMI 2011, 2011, Irsee, Germany, p.308-319

S. T. Gollmer, T. M. Buzug: On the Construction of Optimal 3D Statistical Shape Models of the Human Mandible, Proc. CARS 2011, 2011, Berlin, Germany, p.359-360

F. Schierp, S. T. Gollmer, A. Bischof, T. M. Buzug, A Luecke, J. Barkhausen, M. Simon: Geometrische Basisanalyse der Leber und Milz als Referenzmodell für pathologische Formanalysen und automatische Organsegmentierung, Fortschr Röntgenstr 2011, 2011, Hamburg, Germany, 183

S. T. Gollmer, T. M. Buzug: Verwendung oberflächenbasierter Metriken für die Quantifizierung der Güte statistischer Formmodelle, 44. Jahrestagung der DGBMT, 2010, Rostock, Germany, 55

S. T. Gollmer, T. M. Buzug: A Method for Quantitative Evaluation of Statistical Shape Models Using Morphometry, IEEE International Symposium on Biomedical Imaging: From Nano to Macro, 2010, p.448-451

S. T. Gollmer, T. M. Buzug: Statistische 3D Formmodellierung mittels quasi-verzerrungsfreier sphärischer Parametrisierung, Bildverarbeitung für die Medizin, 2010, p.286-290

G. Zheng, S. Gollmer, S. Schumann, X. Dong, T. Feilkas, M. A. González Ballester: A 2D/3D correspondence building method for reconstruction of a patient-specific 3D bone surface model using point distribution models and calibrated X-ray images, Medical Image Analysis, 2009, 13, 6, p.883-899

S. T. Gollmer, T. M. Buzug: Evaluierung und Verbesserung der initialen Landmarkenkonfiguration für statistische Formmodelle, 39. Jahrestagung der Gesellschaft für Informatik, Lecture Notes in Informatics (LNI), 2009, p.126 : @INPROCEEDINGS{Gollmer2009b, author = {S. T. Gollmer and T. M. Buzug}, title = {Evaluierung und Verbesserung der initialen Landmarkenkonfiguration für statistische Formmodelle}, booktitle = {39. Jahrestagung der Gesellschaft für Informatik, Lecture Notes in Informatics (LNI)}, year = {2009}, pages = {126}, series = {}, volume = {}, keywords = {Medical Image Computing, Medical Image Processing, statistical shape model}, owner = {gollmer}, }

S. T. Gollmer, T. M. Buzug: Improved Landmark Initialization for 3D Statistical Shape Model Generation, World Congress on Medical Physics and Biomedical Engineering, 2009, September, Springer, 25/IV, p.662-665

S. T. Gollmer, R. Lachner, T. M. Buzug: Registration Algorithm for Statistical Bone Shape Reconstruction from Radiographs - An Accuracy Study, Proceedings of the 29th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, 2007, August, The Printing House Inc., p.6375-6378

S. Gollmer, R. Lachner, T. M. Buzug: Evaluation and Enhancement of a Procedure for Generating a 3D Bone Model Using Radiographs, Advances in Medical Engineering, Springer Series: Proceedings in Physics 114, 2007, Feb., Springer, Berlin, p.163-168

Sebastian Gollmer, A Unified Framework for Automatic Construction and Evaluation of 3D Statistical Shape Models, Masterarbeit, Institut für Medizintechnik, Universität zu Lübeck, Lübeck, Deutschland, Nov. 2009.

Sebastian Gollmer, Evaluation and Enhancement of a Procedure for Generating a 3D Bone Model using Radiographs. Diploma Thesis, RheinAhrCampus Remagen, BrainLAB AG, Feldkirchen, 2006.

Sebastian Gollmer, Softwareentwicklung für medizinische Anwendungen am Beispiel myoelektrischer Handprothesen. Internship Report, RheinAhrCampus Remagen, Forschungszentrum Karlsruhe, Institute of Applied Computer Sciences, 2005.